BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB029E08LP1|AL429073
(877 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1139 1711 0.0
>3x_Contig1139
Length = 6062
Score = 1711 bits (863), Expect = 0.0
Identities = 877/879 (99%), Gaps = 2/879 (0%)
Strand = Plus / Plus
Query: 1 ttactctcaaaatttttgataggagtttgtaatgctgatctttatatcctcctcctgggc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3887 ttactctcaaaatttttgataggagtttgtaatgctgatctttatatcctcctcctgggc 3946
Query: 61 ggatttagtggatccctaccaagttcaactagctattctttcatcatagcgcgaacattc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3947 ggatttagtggatccctaccaagttcaactagctattctttcatcatagcgcgaacattc 4006
Query: 121 aacatctatgcacgcacatagatatatattatgtatatatattcatatcgcatagtccaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4007 aacatctatgcacgcacatagatatatattatgtatatatattcatatcgcatagtccaa 4066
Query: 181 aatgacgcgataccataccacaataacgtcaaagacttgacttcaactggttttcaatta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4067 aatgacgcgataccataccacaataacgtcaaagacttgacttcaactggttttcaatta 4126
Query: 241 tcaagagttttttctgttttggtatgtattattagtggcagtattttagagtgtcaccca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4127 tcaagagttttttctgttttggtatgtattattagtggcagtattttagagtgtcaccca 4186
Query: 301 tacgacaggaacagacctgcatatctaaaagaagaaaagagatttcagaagaatttggta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4187 tacgacaggaacagacctgcatatctaaaagaagaaaagagatttcagaagaatttggta 4246
Query: 361 aaaagaacttagacccgcggactggggaaataatttgaaattactacaagacgtcatgca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4247 aaaagaacttagacccgcggactggggaaataatttgaaattactacaagacgtcatgca 4306
Query: 421 gaaatgatattattactttt-cattttcaatggctgcctctattccgaataagacagatg 479
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 4307 gaaatgatattattacttttgcattttcaatggctgcctctattccgaataagacagatg 4366
Query: 480 atacggtatgcaaattcagatatgttatactaagcgaaattttcatatgtaagatgctta 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4367 atacggtatgcaaattcagatatgttatactaagcgaaattttcatatgtaagatgctta 4426
Query: 540 acgccttaatattcttcatgatatgaaaatagttcaaagatacgacgaag-ccggctgaa 598
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 4427 acgccttaatattcttcatgatatgaaaatagttcaaagatacgacgaagtccggctgaa 4486
Query: 599 aagaatggttgtgttgttacttttagccacaaaaggaggttcagtaaaacttgtggtacg 658
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4487 aagaatggttgtgttgttacttttagccacaaaaggaggttcagtaaaacttgtggtacg 4546
Query: 659 caaccaaatctgtgcttttctctaaaacaaagagaaattctatttaattttccgtctaca 718
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4547 caaccaaatctgtgcttttctctaaaacaaagagaaattctatttaattttccgtctaca 4606
Query: 719 ctctatattttgagtcaagtctctgattttgaacagaagcaatgccttcacagttttcac 778
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4607 ctctatattttgagtcaagtctctgattttgaacagaagcaatgccttcacagttttcac 4666
Query: 779 taacgacgatgtcaataaagagcgcctcattctaataacagctattgcatattctcttag 838
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4667 taacgacgatgtcaataaagagcgcctcattctaataacagctattgcatattctcttag 4726
Query: 839 taattcttgtagcatctaaagccgggatatcttctgcga 877
|||||||||||||||||||||||||||||||||||||||
Sbjct: 4727 taattcttgtagcatctaaagccgggatatcttctgcga 4765
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8245
Number of Sequences: 1807
Number of extensions: 8245
Number of successful extensions: 59
Number of sequences better than 1.0e-20: 1
length of query: 877
length of database: 10,358,551
effective HSP length: 16
effective length of query: 861
effective length of database: 10,329,639
effective search space: 8893819179
effective search space used: 8893819179
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)